This page has the list of all fields in the CHAVI database.


CHAVI hosts a wealth of clinical data related to the patients from whom the images have been obtained. This data is available in a relational database which allows you to construct complex queries to search the image data. Thus not only can you access this data of the dataset as a whole but you can also access data across different projects. The database architecture is described in the database page. This page has the list of all available database fields for which clinical data may be available. Please note that data in all fields may not be available for all patients.

Please note that this is the data dictionary and to search the available data you need credentials for the CHAVI repository

You can filter the list by the database table, field type as well as search for text keywords related to the field.

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Data Stored
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Data Base Table Name familyhistory: This table stores information on family history
Database Table Field ID Sort descending Field Type Data Stored in Field Allowed Values
familyhistory affectedfammember Character

The relationship of the affected family member with malignancy e.g. father or mother

NA
familyhistory ageatdiagnosis Integer

Age of the family member at the diagnosis of his/her cancer

NA

Data Base Table Name patientinfo: Patient basic demographic information is captured here. Diagnosis data is linked to this. Also links to habits table, familyhistory,mensthistory and survival tables.
Database Table Field ID Sort descending Field Type Data Stored in Field Allowed Values
patientinfo age Integer

Age of the patient in years.

NA

Data Base Table Name mensthistory: Stores data on menstrual history
Database Table Field ID Sort descending Field Type Data Stored in Field Allowed Values
mensthistory ageatmenopause Integer

Age at which patient become postmenopausal

NA

Data Base Table Name diagnosis: Links to patient information and has information on the diagnosed disease. All treatment data and recurrence data links to the diagnosis table.
Database Table Field ID Sort descending Field Type Data Stored in Field Allowed Values
diagnosis anatomicsite Character

This is a field that allows values from a list of anatomic sites.

From Lookup table

Data Base Table Name tumorpathology: This table stores information on the pathological information on the tumor.  The table is linked to the following table: diagnosis
Database Table Field ID Sort descending Field Type Data Stored in Field Allowed Values
tumorpathology angioinvasion Boolean

If angioinvasion is observed in the tumor

1, 0

Data Base Table Name brachytherapy: This table has the data regardiing brachytherapy received by the patient.
Database Table Field ID Sort descending Field Type Data Stored in Field Allowed Values
brachytherapy brachy_is_reirradiation Boolean

If this schedule of radiation was re-irradiation

1, 0
brachytherapy brachyapplicator Character

Applicator used for brachytherapy

NA
brachytherapy brachyequipment Character

Name of equipment in which radiation was delivered

NA
brachytherapy brachyherapy_fractions Integer

Number of fractions given

NA