This page has the list of all fields in the CHAVI database.


CHAVI hosts a wealth of clinical data related to the patients from whom the images have been obtained. This data is available in a relational database which allows you to construct complex queries to search the image data. Thus not only can you access this data of the dataset as a whole but you can also access data across different projects. The database architecture is described in the database page. This page has the list of all available database fields for which clinical data may be available. Please note that data in all fields may not be available for all patients.

Please note that this is the data dictionary and to search the available data you need credentials for the CHAVI repository

You can filter the list by the database table, field type as well as search for text keywords related to the field.

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Data Stored
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Data Base Table Name drugtable: Stores data on drugs received by patient. This can include drugs which are anti-neoplastic as well as other drugs but are linked to a specific diagnosis and stage. 
Database Table Field ID Field Type Data Stored in Field Allowed Values
drugtable drug_dose_unit Character

Unit in which drug dose is measured. Please convert all doses to mg or ml for standardization.

milligram, millilitre
drugtable drug_end_date Date

Date when drug was stopped or cycles ended.

NA
drugtable drug_name Character

Name of the drug used. Please use the generic name.

NA
drugtable drug_start_date Date

Date on which the drug was started

NA

Data Base Table Name nodalstatus: The nodal status table has information on the nodal involvement noted in pathology. Please note that this table is not capturing information obtained in radiological evaluation. The table is linked to diagnosis to allow situations where patient has unknown primary with neck nodes.  The table is linked to the following tables: diagnosis  
Database Table Field ID Field Type Data Stored in Field Allowed Values
nodalstatus extra_nodal_extension Boolean

If extranodal extension is present

1, 0
nodalstatus node_level Character

The level(s) in which the nodes were removed and examined in the pathology specimen. Applicable for cervical and mediastinal nodal dissection mostly

NA
nodalstatus nodes_examined Integer

Number of nodes examined in the pathology specimen

NA
nodalstatus nodes_itc Integer

Number of nodes with isolated tumor cells found in pathology

NA
nodalstatus nodes_micromets Integer

Number of nodes with micrometastases in pathology

NA
nodalstatus nodes_positive Integer

Number of nodes found positive in the pathology specimen

NA